RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04070.1 View Network Show in Genome Browser |
| Other Names | Os03g0133000 |
| Description | no apical meristem protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1862352-1864245 Nucleotide Length: 951 |
| Protein-coding | LOC_Os03g04070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15810 LOC_Os01g42030 LOC_Os01g57610 |
| Downstream Genes | LOC_Os07g12890 LOC_Os05g51130 LOC_Os03g56580 LOC_Os09g16510 LOC_Os09g25960 LOC_Os06g18000 LOC_Os09g25990 LOC_Os09g26000 LOC_Os04g58090 LOC_Os09g04339 LOC_Os11g38780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04070.1 |
| Rice Genome Annotation | LOC_Os03g04070.1 |
| Ricechip | LOC_Os03g04070.1 |
| KEGG | osa:4331520 dosa:Os03t0133000-01 |
| Entrez-Gene | 4331520 |