RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04110.1 View Network Show in Genome Browser |
| Other Names | Os03g0133400 |
| Description | lysM domain-containing GPI-anchored protein precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1878906-1881754 Nucleotide Length: 1071 |
| Protein-coding | LOC_Os03g04110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65370 |
| Downstream Genes | LOC_Os04g50680 LOC_Os07g10460 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6253 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04110.1 |
| Rice Genome Annotation | LOC_Os03g04110.1 |
| Ricechip | LOC_Os03g04110.1 |
| KEGG | osa:4331523 dosa:Os03t0133400-01 |
| Entrez-Gene | 4331523 |