RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04120.1 View Network Show in Genome Browser |
| Other Names | Os03g0133500 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1881834-1884078 Nucleotide Length: 1653 |
| Protein-coding | LOC_Os03g04120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19150 LOC_Os02g41550 LOC_Os03g02640 LOC_Os01g01160 LOC_Os02g13970 LOC_Os02g45344 LOC_Os02g41670 LOC_Os02g41680 LOC_Os01g72950 LOC_Os02g41650 LOC_Os01g27940 More.. |
| Downstream Genes | LOC_Os03g41080 LOC_Os03g31490 LOC_Os07g23880 LOC_Os07g32670 LOC_Os04g33940 LOC_Os06g20610 LOC_Os07g06660 LOC_Os09g39560 LOC_Os06g45480 LOC_Os06g49040 LOC_Os10g29470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04120.1 |
| Rice Genome Annotation | LOC_Os03g04120.1 |
| Ricechip | LOC_Os03g04120.1 |
| KEGG | osa:4331524 dosa:Os03t0133500-01 |
| Entrez-Gene | 4331524 |