RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04130.1 View Network Show in Genome Browser |
| Other Names | Os03g0133800 |
| Description | AMP-binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1885975-1891309 Nucleotide Length: 1950 |
| Protein-coding | LOC_Os03g04130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45344 LOC_Os02g41670 LOC_Os02g41680 LOC_Os02g41650 |
| Downstream Genes | LOC_Os10g29470 LOC_Os04g52280 LOC_Os05g24550 LOC_Os04g40990 LOC_Os12g16350 LOC_Os04g45040 LOC_Os03g41080 LOC_Os05g35290 LOC_Os04g43800 LOC_Os08g16910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04130.1 |
| Rice Genome Annotation | LOC_Os03g04130.1 |
| Ricechip | LOC_Os03g04130.1 |
| KEGG | dosa:Os03t0133800-01 |
| Entrez-Gene | 9268242 |