RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04140.2 View Network Show in Genome Browser |
| Other Names | Os03g0133900 |
| Description | serine acetyltransferase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1892824-1897309 Nucleotide Length: 981 |
| Protein-coding | LOC_Os03g04140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g30460 LOC_Os01g52400 LOC_Os01g62840 LOC_Os02g56740 LOC_Os02g18320 LOC_Os01g14100 LOC_Os01g14950 LOC_Os02g38230 LOC_Os02g45660 LOC_Os01g24060 LOC_Os01g40860 More.. |
| Downstream Genes | LOC_Os07g04200 LOC_Os08g04180 LOC_Os06g42120 LOC_Os07g08430 LOC_Os11g37920 LOC_Os08g13930 LOC_Os11g13420 LOC_Os05g25400 LOC_Os05g39950 LOC_Os03g16150 LOC_Os03g15770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04140.2 |
| Rice Genome Annotation | LOC_Os03g04140.2 |
| Ricechip | LOC_Os03g04140.2 |
| KEGG | osa:4331528 dosa:Os03t0133900-01 |
| Entrez-Gene | 4331528 |