RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04220.1 View Network Show in Genome Browser |
| Other Names | Os03g0134900 |
| Description | glutathione S-transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1938202-1939691 Nucleotide Length: 960 |
| Protein-coding | LOC_Os03g04220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27630 LOC_Os02g21460 LOC_Os02g12794 LOC_Os02g12800 LOC_Os01g08140 LOC_Os01g27390 LOC_Os02g43850 LOC_Os01g55220 LOC_Os01g55830 LOC_Os01g27360 LOC_Os01g27340 More.. |
| Downstream Genes | LOC_Os03g04240 LOC_Os04g38450 LOC_Os06g37440 LOC_Os03g49600 LOC_Os03g53400 LOC_Os10g39740 LOC_Os04g41960 LOC_Os03g18980 LOC_Os06g12580 LOC_Os04g52900 LOC_Os05g05620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2275d |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04220.1 |
| Rice Genome Annotation | LOC_Os03g04220.1 |
| Ricechip | LOC_Os03g04220.1 |
| KEGG | osa:4331532 dosa:Os03t0134900-01 |
| Entrez-Gene | 4331532 |