RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04310.2 View Network Show in Genome Browser |
| Other Names | Os03g0135700 |
| Description | BHLH transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 1983522-1985736 Nucleotide Length: 1062 |
| Protein-coding | LOC_Os03g04310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56740 LOC_Os01g55950 LOC_Os02g45250 LOC_Os02g52470 |
| Downstream Genes | LOC_Os05g50900 LOC_Os08g39490 LOC_Os08g39550 LOC_Os09g13680 LOC_Os06g40960 LOC_Os04g48070 |
| Reference | |
|---|---|
| PubMed | 22437844 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04310.2 |
| Rice Genome Annotation | LOC_Os03g04310.2 |
| Ricechip | LOC_Os03g04310.2 |
| KEGG | osa:4331538 dosa:Os03t0135700-01 |
| Entrez-Gene | 4331538 |