RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04680.1 View Network Show in Genome Browser |
| Other Names | Os03g0140400 |
| Description | cytochrome P450, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2223102-2225205 Nucleotide Length: 1617 |
| Protein-coding | LOC_Os03g04680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g41810 LOC_Os01g41820 LOC_Os01g43720 LOC_Os02g30090 LOC_Os02g36030 LOC_Os01g50590 LOC_Os02g26770 LOC_Os02g26810 LOC_Os01g72760 |
| Downstream Genes | LOC_Os03g40600 LOC_Os05g25640 LOC_Os03g44740 LOC_Os03g39540 LOC_Os08g39640 LOC_Os08g39730 LOC_Os07g26870 LOC_Os04g33370 LOC_Os08g39694 LOC_Os04g39430 LOC_Os06g36920 More.. |
| Reference | |
|---|---|
| PubMed | 22140509 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04680.1 |
| Rice Genome Annotation | LOC_Os03g04680.1 |
| Ricechip | LOC_Os03g04680.1 |
| KEGG | osa:9270900 dosa:Os03t0140400-01 |
| Entrez-Gene | 9270900 |