RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04780.1 View Network Show in Genome Browser |
| Other Names | Os03g0141300 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2276860-2277298 Nucleotide Length: 333 |
| Protein-coding | LOC_Os03g04780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40900 LOC_Os01g26940 LOC_Os02g54690 LOC_Os02g35950 LOC_Os01g74340 LOC_Os02g52140 LOC_Os02g57010 LOC_Os01g16090 LOC_Os03g03140 LOC_Os02g11750 LOC_Os02g54700 More.. |
| Downstream Genes | LOC_Os08g40880 LOC_Os07g42380 LOC_Os07g43810 LOC_Os09g39180 LOC_Os05g13620 LOC_Os05g13630 LOC_Os03g61990 LOC_Os05g13650 LOC_Os09g02700 LOC_Os11g40510 LOC_Os03g25960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04780.1 |
| Rice Genome Annotation | LOC_Os03g04780.1 |
| Ricechip | LOC_Os03g04780.1 |