RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g04940.1 View Network Show in Genome Browser |
| Other Names | Os03g0143000 |
| Description | methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2380026-2384652 Nucleotide Length: 1611 |
| Protein-coding | LOC_Os03g04940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49250 LOC_Os01g19840 LOC_Os02g03540 LOC_Os01g71230 LOC_Os01g67134 LOC_Os01g62350 LOC_Os01g59140 LOC_Os02g05330 |
| Downstream Genes | LOC_Os07g47150 LOC_Os07g06970 LOC_Os05g28750 LOC_Os04g36810 LOC_Os08g23110 LOC_Os08g05490 LOC_Os04g58350 LOC_Os11g43900 LOC_Os06g43760 LOC_Os05g39960 LOC_Os05g38520 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00380 rn00624 rn01120 rn00340 rn00350 rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g04940.1 |
| Rice Genome Annotation | LOC_Os03g04940.1 |
| Ricechip | LOC_Os03g04940.1 |
| KEGG | osa:4331587 dosa:Os03t0143000-01 |
| Entrez-Gene | 4331587 |