RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05570.1 View Network Show in Genome Browser |
| Other Names | Os03g0149800 |
| Description | RING-H2 finger protein ATL3F, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2776612-2777769 Nucleotide Length: 903 |
| Protein-coding | LOC_Os03g05570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47870 LOC_Os02g31150 LOC_Os01g57110 LOC_Os02g19804 LOC_Os02g33450 LOC_Os02g09060 LOC_Os01g01700 LOC_Os02g51770 LOC_Os02g44500 LOC_Os01g62290 |
| Downstream Genes | LOC_Os06g11790 LOC_Os03g54091 LOC_Os08g44770 LOC_Os06g19680 LOC_Os12g01190 LOC_Os04g46450 LOC_Os04g53720 LOC_Os04g09800 LOC_Os04g31390 LOC_Os07g41800 LOC_Os04g50760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05570.1 |
| Rice Genome Annotation | LOC_Os03g05570.1 |
| Ricechip | LOC_Os03g05570.1 |
| KEGG | osa:4331632 dosa:Os03t0149800-01 |
| Entrez-Gene | 4331632 |