RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05720.1 View Network Show in Genome Browser |
| Other Names | Os03g0151700 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2845709-2851689 Nucleotide Length: 2823 |
| Protein-coding | LOC_Os03g05720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50370 LOC_Os02g54110 LOC_Os03g02110 LOC_Os02g13110 LOC_Os01g40340 LOC_Os01g08770 LOC_Os01g13730 LOC_Os03g02420 LOC_Os02g57590 LOC_Os02g18830 LOC_Os01g57910 More.. |
| Downstream Genes | LOC_Os07g41190 LOC_Os06g43690 LOC_Os04g50660 LOC_Os05g44320 LOC_Os04g46310 LOC_Os07g10350 LOC_Os09g18320 LOC_Os11g19250 LOC_Os03g52470 LOC_Os04g52200 LOC_Os10g25110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05720.1 |
| Rice Genome Annotation | LOC_Os03g05720.1 |
| Ricechip | LOC_Os03g05720.1 |
| KEGG | osa:4331644 dosa:Os03t0151700-01 |
| Entrez-Gene | 4331644 |