RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05730.1 View Network Show in Genome Browser |
| Other Names | Os03g0151800 |
| Description | cell division control protein 48 homolog E, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2852293-2856682 Nucleotide Length: 2430 |
| Protein-coding | LOC_Os03g05730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08480 LOC_Os02g37000 LOC_Os01g32800 LOC_Os01g63710 LOC_Os02g06890 LOC_Os01g66330 LOC_Os02g21970 LOC_Os01g63250 LOC_Os02g35630 LOC_Os02g38920 LOC_Os02g19150 More.. |
| Downstream Genes | LOC_Os04g39040 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os07g03160 LOC_Os04g48520 LOC_Os04g48770 LOC_Os04g40870 LOC_Os03g11570 LOC_Os05g44310 LOC_Os03g31400 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | CHLOROPHYLL-SYN |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05730.1 |
| Rice Genome Annotation | LOC_Os03g05730.1 |
| Ricechip | LOC_Os03g05730.1 |
| KEGG | osa:4331645 dosa:Os03t0151800-02 |
| Entrez-Gene | 4331645 |