RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05760.1 View Network Show in Genome Browser |
| Other Names | Os03g0152100 |
| Description | transcription factor Dp, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2870362-2875430 Nucleotide Length: 696 |
| Protein-coding | LOC_Os03g05760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33430 LOC_Os02g50630 LOC_Os02g56130 LOC_Os02g03060 LOC_Os01g63710 LOC_Os01g65920 LOC_Os02g36974 LOC_Os02g32160 LOC_Os01g72890 LOC_Os01g49000 LOC_Os02g03890 More.. |
| Downstream Genes | LOC_Os12g06200 LOC_Os11g32900 LOC_Os12g39210 LOC_Os12g31810 LOC_Os04g10650 LOC_Os11g29390 LOC_Os12g03130 LOC_Os11g03430 LOC_Os11g28350 LOC_Os08g42600 LOC_Os05g32600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05760.1 |
| Rice Genome Annotation | LOC_Os03g05760.1 |
| Ricechip | LOC_Os03g05760.1 |
| KEGG | osa:4331648 dosa:Os03t0152100-01 |
| Entrez-Gene | 4331648 |