RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05870.1 View Network Show in Genome Browser |
| Other Names | Os03g0153400 |
| Description | Fe-S metabolism associated domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2947350-2948285 Nucleotide Length: 483 |
| Protein-coding | LOC_Os03g05870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64680 LOC_Os01g18660 LOC_Os01g18640 LOC_Os01g61400 |
| Downstream Genes | LOC_Os12g18900 LOC_Os03g21490 LOC_Os06g14040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05870.1 |
| Rice Genome Annotation | LOC_Os03g05870.1 |
| Ricechip | LOC_Os03g05870.1 |
| KEGG | osa:4331656 dosa:Os03t0153400-01 |
| Entrez-Gene | 4331656 |