RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g05990.1 View Network Show in Genome Browser |
| Other Names | Os03g0155000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 2992796-2995344 Nucleotide Length: 864 |
| Protein-coding | LOC_Os03g05990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05680 LOC_Os01g42850 |
| Downstream Genes | LOC_Os03g12900 LOC_Os03g62260 LOC_Os03g12910 LOC_Os04g35060 LOC_Os03g17020 LOC_Os06g14040 LOC_Os11g05970 LOC_Os03g62110 LOC_Os08g43190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g05990.1 |
| Rice Genome Annotation | LOC_Os03g05990.1 |
| Ricechip | LOC_Os03g05990.1 |
| KEGG | dosa:Os03t0155000-00 |