RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06190.1 View Network Show in Genome Browser |
| Other Names | Os03g0157800 |
| Description | 3-5 exonuclease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3103834-3109803 Nucleotide Length: 1803 |
| Protein-coding | LOC_Os03g06190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03710 LOC_Os02g37870 LOC_Os02g34570 LOC_Os01g66730 LOC_Os01g47256 LOC_Os02g57070 LOC_Os03g02420 LOC_Os01g14950 LOC_Os01g65220 LOC_Os01g19470 LOC_Os02g42040 More.. |
| Downstream Genes | LOC_Os04g43922 LOC_Os06g12990 LOC_Os05g48422 LOC_Os03g49210 LOC_Os10g10434 LOC_Os03g63720 LOC_Os09g07820 LOC_Os07g45360 LOC_Os12g03822 LOC_Os11g03990 LOC_Os05g06350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06190.1 |
| Rice Genome Annotation | LOC_Os03g06190.1 |
| Ricechip | LOC_Os03g06190.1 |
| KEGG | osa:4331677 dosa:Os03t0157800-02 |
| Entrez-Gene | 4331677 |