RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06230.1 View Network Show in Genome Browser |
| Other Names | Os03g0158300 |
| Description | galactose mutarotase-like, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3119831-3123758 Nucleotide Length: 1080 |
| Protein-coding | LOC_Os03g06230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46950 LOC_Os01g72340 |
| Downstream Genes | LOC_Os09g17630 LOC_Os09g15820 LOC_Os04g56290 LOC_Os04g38530 LOC_Os03g26430 LOC_Os11g32260 LOC_Os06g13650 LOC_Os03g22200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06230.1 |
| Rice Genome Annotation | LOC_Os03g06230.1 |
| Ricechip | LOC_Os03g06230.1 |
| KEGG | osa:4331681 dosa:Os03t0158300-01 |
| Entrez-Gene | 4331681 |