RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06410.1 View Network Show in Genome Browser |
| Other Names | Os03g0160100 |
| Description | protein kinase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3201312-3208299 Nucleotide Length: 3054 |
| Protein-coding | LOC_Os03g06410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os02g15594 LOC_Os02g55560 LOC_Os02g35910 LOC_Os02g55970 LOC_Os02g07900 LOC_Os01g50010 LOC_Os02g38780 LOC_Os02g12600 LOC_Os02g39410 LOC_Os01g49330 More.. |
| Downstream Genes | LOC_Os06g33549 LOC_Os06g48300 LOC_Os04g37904 LOC_Os04g56450 LOC_Os07g32380 LOC_Os06g33530 LOC_Os06g07830 LOC_Os10g39540 LOC_Os03g18150 LOC_Os06g44210 LOC_Os04g52000 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06410.1 |
| Rice Genome Annotation | LOC_Os03g06410.1 |
| Ricechip | LOC_Os03g06410.1 |
| KEGG | osa:4331696 dosa:Os03t0160100-01 |
| Entrez-Gene | 4331696 |