RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06440.1 View Network Show in Genome Browser |
| Other Names | Os03g0160400 |
| Description | RNA helicase SDE3, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3215478-3220186 Nucleotide Length: 2880 |
| Protein-coding | LOC_Os03g06440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50460 |
| Downstream Genes | LOC_Os06g13870 LOC_Os04g43130 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06440.1 |
| Rice Genome Annotation | LOC_Os03g06440.1 |
| Ricechip | LOC_Os03g06440.1 |
| KEGG | osa:4331698 dosa:Os03t0160400-01 |
| Entrez-Gene | 4331698 |