RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06630.1 View Network Show in Genome Browser |
| Other Names | Os03g0161900 |
| Description | heat stress transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3342254-3344548 Nucleotide Length: 1140 |
| Protein-coding | LOC_Os03g06630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34840 LOC_Os01g73890 LOC_Os01g46020 LOC_Os01g62290 LOC_Os01g13760 LOC_Os01g54550 LOC_Os02g36974 LOC_Os01g63780 LOC_Os03g03130 LOC_Os01g04380 LOC_Os01g04370 More.. |
| Downstream Genes | LOC_Os03g16920 LOC_Os05g01710 LOC_Os05g28010 LOC_Os03g45410 LOC_Os03g63920 LOC_Os12g39070 LOC_Os05g38530 LOC_Os03g60620 LOC_Os11g47760 LOC_Os03g16860 LOC_Os10g28340 More.. |
| Reference | |
|---|---|
| PubMed | 21792744 19192388 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06630.1 |
| Rice Genome Annotation | LOC_Os03g06630.1 |
| Ricechip | LOC_Os03g06630.1 |
| KEGG | osa:4331708 dosa:Os03t0161900-01 |
| Entrez-Gene | 4331708 |