RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06880.1 View Network Show in Genome Browser |
| Other Names | Os03g0164700 |
| Description | kinase, pfkB family, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3479411-3482220 Nucleotide Length: 1413 |
| Protein-coding | LOC_Os03g06880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01620 LOC_Os01g63220 LOC_Os02g41590 |
| Downstream Genes | LOC_Os03g40550 LOC_Os05g09370 LOC_Os09g12240 LOC_Os08g25380 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00030 |
| Metacyc Pathways | RIBOKIN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06880.1 |
| Rice Genome Annotation | LOC_Os03g06880.1 |
| Ricechip | LOC_Os03g06880.1 |
| KEGG | osa:4331726 dosa:Os03t0164700-01 |
| Entrez-Gene | 4331726 |