RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06940.2 View Network Show in Genome Browser |
| Other Names | Os03g0165400 |
| Description | beta-galactosidase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3525793-3531350 Nucleotide Length: 2460 |
| Protein-coding | LOC_Os03g06940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47420 LOC_Os01g09860 LOC_Os01g55190 LOC_Os02g09930 LOC_Os02g53200 LOC_Os01g73790 LOC_Os02g57140 |
| Downstream Genes | LOC_Os07g01860 LOC_Os07g31840 LOC_Os03g57780 LOC_Os03g16010 LOC_Os03g14610 LOC_Os07g40940 LOC_Os09g32968 LOC_Os05g45930 LOC_Os07g38590 LOC_Os11g26190 LOC_Os06g36050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06940.2 |
| Rice Genome Annotation | LOC_Os03g06940.2 |
| Ricechip | LOC_Os03g06940.2 |
| KEGG | osa:4331730 dosa:Os03t0165400-01 |
| Entrez-Gene | 4331730 |