RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g06950.1 View Network Show in Genome Browser |
| Other Names | Os03g0165600 |
| Description | ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3540151-3550714 Nucleotide Length: 4740 |
| Protein-coding | LOC_Os03g06950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44104 |
| Downstream Genes | LOC_Os08g08220 LOC_Os10g41030 LOC_Os11g34300 LOC_Os03g11200 LOC_Os07g07690 LOC_Os03g13614 LOC_Os05g41070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g06950.1 |
| Rice Genome Annotation | LOC_Os03g06950.1 |
| Ricechip | LOC_Os03g06950.1 |
| KEGG | osa:4331732 dosa:Os03t0165600-01 |
| Entrez-Gene | 4331732 |