RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g07080.3 View Network Show in Genome Browser |
| Other Names | Os03g0166800 |
| Description | endonuclease/exonuclease/phosphatase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3616666-3622207 Nucleotide Length: 1683 |
| Protein-coding | LOC_Os03g07080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g55300 LOC_Os02g54120 LOC_Os01g23630 LOC_Os03g01240 LOC_Os02g42860 LOC_Os01g08780 LOC_Os02g13640 LOC_Os01g56550 LOC_Os02g19880 LOC_Os03g06460 LOC_Os02g51600 More.. |
| Downstream Genes | LOC_Os10g40780 LOC_Os07g37790 LOC_Os04g52340 LOC_Os09g24990 LOC_Os03g44900 LOC_Os12g01190 LOC_Os03g52594 LOC_Os03g57130 LOC_Os08g06070 LOC_Os10g42950 LOC_Os08g34170 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2920 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g07080.3 |
| Rice Genome Annotation | LOC_Os03g07080.3 |
| Ricechip | LOC_Os03g07080.3 |
| KEGG | osa:4331740 dosa:Os03t0166800-01 |
| Entrez-Gene | 4331740 |