RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g07570.4 View Network Show in Genome Browser |
| Other Names | Os03g0171900 |
| Description | aminotransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3855439-3858411 Nucleotide Length: 1461 |
| Protein-coding | LOC_Os03g07570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50350 LOC_Os01g65070 LOC_Os02g27760 LOC_Os02g19770 LOC_Os02g41590 LOC_Os01g71270 LOC_Os02g47590 LOC_Os01g22010 LOC_Os01g16910 LOC_Os01g05694 LOC_Os03g02480 More.. |
| Downstream Genes | LOC_Os10g36760 LOC_Os03g54790 LOC_Os10g25950 LOC_Os10g26010 LOC_Os06g46372 LOC_Os11g20790 LOC_Os08g14770 LOC_Os10g37690 LOC_Os10g25930 LOC_Os11g11050 LOC_Os05g35730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g07570.4 |
| Rice Genome Annotation | LOC_Os03g07570.4 |
| Ricechip | LOC_Os03g07570.4 |
| KEGG | osa:4331779 dosa:Os03t0171900-01 |
| Entrez-Gene | 4331779 |