RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g07600.1 View Network Show in Genome Browser |
| Other Names | Os03g0172200 |
| Description | calcium-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3866687-3866935 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os03g07600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45820 LOC_Os01g09200 LOC_Os02g03450 LOC_Os01g55820 LOC_Os02g12380 LOC_Os02g12350 |
| Downstream Genes | LOC_Os05g43570 LOC_Os12g19290 LOC_Os10g33640 LOC_Os11g40150 LOC_Os12g31370 LOC_Os12g09000 LOC_Os04g57750 LOC_Os09g09460 LOC_Os05g45420 LOC_Os09g26440 LOC_Os06g02620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR390-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g07600.1 |
| Rice Genome Annotation | LOC_Os03g07600.1 |
| Ricechip | LOC_Os03g07600.1 |
| KEGG | osa:4331782 dosa:Os03t0172200-01 |
| Entrez-Gene | 4331782 |