RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g07840.1 View Network Show in Genome Browser |
| Other Names | Os03g0174500 |
| Description | adenylosuccinate synthetase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 3986729-3989999 Nucleotide Length: 1467 |
| Protein-coding | LOC_Os03g07840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11460 LOC_Os01g51120 LOC_Os01g37980 LOC_Os02g57670 LOC_Os01g68320 LOC_Os01g70780 LOC_Os01g16900 LOC_Os02g51780 LOC_Os01g74000 LOC_Os02g02410 LOC_Os01g72880 More.. |
| Downstream Genes | LOC_Os08g45010 LOC_Os09g39910 LOC_Os06g09570 LOC_Os07g01920 LOC_Os07g09060 LOC_Os10g41960 LOC_Os09g29190 LOC_Os03g63410 LOC_Os12g37610 LOC_Os11g38020 LOC_Os09g10820 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00250 rn01100 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 P121-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g07840.1 |
| Rice Genome Annotation | LOC_Os03g07840.1 |
| Ricechip | LOC_Os03g07840.1 |
| KEGG | osa:4331792 dosa:Os03t0174500-01 |
| Entrez-Gene | 4331792 |