RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os03g08050.1 View Network Show in Genome Browser |
Other Names | Os03g0177900 |
Description | elongation factor Tu, putative, expressed |
Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4111409-4113361 Nucleotide Length: 1344 |
Protein-coding | LOC_Os03g08050 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005739 | mitochondrion | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g49290 LOC_Os01g67134 LOC_Os02g38920 LOC_Os01g59730 LOC_Os02g47140 LOC_Os02g01332 LOC_Os01g61814 LOC_Os01g59990 LOC_Os02g32030 LOC_Os02g28810 LOC_Os01g16890 More.. |
Downstream Genes | LOC_Os03g58204 LOC_Os07g08330 LOC_Os06g14740 LOC_Os05g41110 LOC_Os03g40180 LOC_Os06g37440 LOC_Os05g19370 LOC_Os12g03880 LOC_Os11g04070 LOC_Os11g03400 LOC_Os04g58110 More.. |
Database Links | |
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Gramene | LOC_Os03g08050.1 |
Rice Genome Annotation | LOC_Os03g08050.1 |
Ricechip | LOC_Os03g08050.1 |
KEGG | osa:4331812 dosa:Os03t0177900-01 |
Entrez-Gene | 4331812 |