RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08080.1 View Network Show in Genome Browser |
| Other Names | Os03g0178200 |
| Description | YGGT family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4129653-4131193 Nucleotide Length: 717 |
| Protein-coding | LOC_Os03g08080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04460 LOC_Os02g33450 LOC_Os02g15900 LOC_Os01g48690 LOC_Os03g03020 LOC_Os02g02390 LOC_Os01g54540 LOC_Os01g71990 LOC_Os01g72800 LOC_Os03g03360 LOC_Os01g54390 More.. |
| Downstream Genes | LOC_Os03g61260 LOC_Os03g55930 LOC_Os03g17580 LOC_Os05g05740 LOC_Os05g27100 LOC_Os03g60100 LOC_Os06g49160 LOC_Os04g58970 LOC_Os05g01970 LOC_Os03g62630 LOC_Os09g24670 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08080.1 |
| Rice Genome Annotation | LOC_Os03g08080.1 |
| Ricechip | LOC_Os03g08080.1 |
| KEGG | osa:4331815 dosa:Os03t0178200-01 |
| Entrez-Gene | 4331815 |