RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08230.1 View Network Show in Genome Browser |
| Other Names | Os03g0180000 |
| Description | sodium/calcium exchanger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4194283-4196467 Nucleotide Length: 1920 |
| Protein-coding | LOC_Os03g08230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11414 LOC_Os02g11670 LOC_Os01g53420 LOC_Os01g53380 LOC_Os01g53370 LOC_Os01g53390 LOC_Os02g56014 LOC_Os01g50200 LOC_Os02g11640 LOC_Os02g11700 LOC_Os01g64910 More.. |
| Downstream Genes | LOC_Os03g27960 LOC_Os09g16090 LOC_Os07g30610 LOC_Os06g18790 LOC_Os05g45180 LOC_Os05g08510 LOC_Os06g18670 LOC_Os04g51690 LOC_Os07g30330 LOC_Os11g43860 LOC_Os07g30760 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08230.1 |
| Rice Genome Annotation | LOC_Os03g08230.1 |
| Ricechip | LOC_Os03g08230.1 |
| KEGG | osa:4331825 dosa:Os03t0180000-00 |
| Entrez-Gene | 4331825 |