RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08300.1 View Network Show in Genome Browser |
| Other Names | Os03g0180700 |
| Description | glycosyl transferase, group 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4223430-4228468 Nucleotide Length: 1422 |
| Protein-coding | LOC_Os03g08300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40870 LOC_Os01g11070 LOC_Os02g12740 LOC_Os01g69030 LOC_Os01g46430 LOC_Os01g43380 LOC_Os01g35050 LOC_Os01g62840 LOC_Os01g42430 LOC_Os02g38440 LOC_Os02g02110 More.. |
| Downstream Genes | LOC_Os04g49960 LOC_Os12g39340 LOC_Os07g16960 LOC_Os10g30070 LOC_Os05g32720 LOC_Os09g12530 LOC_Os08g20660 LOC_Os07g01030 LOC_Os04g34000 LOC_Os03g11560 LOC_Os10g30156 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00510 rn00513 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08300.1 |
| Rice Genome Annotation | LOC_Os03g08300.1 |
| Ricechip | LOC_Os03g08300.1 |
| KEGG | osa:4331831 dosa:Os03t0180700-01 |
| Entrez-Gene | 4331831 |