RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08330.1 View Network Show in Genome Browser |
| Other Names | Os03g0181100 |
| Description | ZIM domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4248884-4249985 Nucleotide Length: 564 |
| Protein-coding | LOC_Os03g08330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01740 LOC_Os02g08440 LOC_Os02g11070 LOC_Os03g08310 LOC_Os01g50420 LOC_Os03g08320 LOC_Os01g04330 LOC_Os01g28790 LOC_Os02g41510 |
| Downstream Genes | LOC_Os08g36920 LOC_Os03g53020 LOC_Os04g43680 LOC_Os11g05380 LOC_Os10g25230 LOC_Os12g05440 LOC_Os06g44010 LOC_Os08g37660 LOC_Os06g46950 LOC_Os03g52410 LOC_Os04g02910 More.. |
| Reference | |
|---|---|
| PubMed | 19618278 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08330.1 |
| Rice Genome Annotation | LOC_Os03g08330.1 |
| Ricechip | LOC_Os03g08330.1 |
| KEGG | osa:4331834 dosa:Os03t0181100-01 |
| Entrez-Gene | 4331834 |