RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08450.1 View Network Show in Genome Browser |
| Other Names | Os03g0182700 |
| Description | eukaryotic translation initiation factor 3 subunit K, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4339450-4342736 Nucleotide Length: 681 |
| Protein-coding | LOC_Os03g08450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67134 LOC_Os01g10820 LOC_Os02g27760 LOC_Os02g47140 LOC_Os02g06700 LOC_Os02g33140 LOC_Os02g14059 LOC_Os02g28810 LOC_Os01g59990 LOC_Os01g16890 LOC_Os02g01332 More.. |
| Downstream Genes | LOC_Os07g10720 LOC_Os11g03400 LOC_Os04g50990 LOC_Os03g13170 LOC_Os07g12250 LOC_Os12g03090 LOC_Os03g18580 LOC_Os03g18570 LOC_Os09g39500 LOC_Os07g10660 LOC_Os11g29190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08450.1 |
| Rice Genome Annotation | LOC_Os03g08450.1 |
| Ricechip | LOC_Os03g08450.1 |
| KEGG | osa:4331842 dosa:Os03t0182700-02 |
| Entrez-Gene | 4331842 |