RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08624.1 View Network Show in Genome Browser |
| Other Names | Os03g0184550 |
| Description | dihydroflavonol-4-reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4441956-4443834 Nucleotide Length: 1026 |
| Protein-coding | LOC_Os03g08624 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08180 LOC_Os02g02410 LOC_Os01g40660 LOC_Os02g48110 LOC_Os03g01180 LOC_Os01g22520 LOC_Os01g68324 LOC_Os01g38510 LOC_Os01g55040 LOC_Os01g23740 LOC_Os02g02524 More.. |
| Downstream Genes | LOC_Os07g10830 LOC_Os04g40950 LOC_Os09g38530 LOC_Os06g49480 LOC_Os05g06440 LOC_Os03g14990 LOC_Os04g30760 LOC_Os11g09280 LOC_Os03g36730 LOC_Os05g44360 LOC_Os08g17680 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00941 rn01100 rn01110 rn00051 rn00520 rn00052 |
| Metacyc Pathways | PWY1F-823 PWY-5152 PWY-2582 PWY-66 GDPRHAMSYN-PWY UDPNACETYLGALSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08624.1 |
| Rice Genome Annotation | LOC_Os03g08624.1 |
| Ricechip | LOC_Os03g08624.1 |
| KEGG | osa:9269735 dosa:Os03t0184550-01 |
| Entrez-Gene | 9269735 |