RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08630.1 View Network Show in Genome Browser |
| Other Names | Os03g0184600 |
| Description | NAD-dependent epimerase/dehydratase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4444015-4446472 Nucleotide Length: 342 |
| Protein-coding | LOC_Os03g08630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04710 |
| Downstream Genes | LOC_Os11g18366 LOC_Os08g17500 LOC_Os11g35710 LOC_Os11g18194 LOC_Os12g43130 LOC_Os06g51290 LOC_Os09g38320 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08630.1 |
| Rice Genome Annotation | LOC_Os03g08630.1 |
| Ricechip | LOC_Os03g08630.1 |
| KEGG | osa:9272175 dosa:Os03t0184600-01 |
| Entrez-Gene | 9272175 |