RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08640.2 View Network Show in Genome Browser |
| Other Names | Os03g0184700 |
| Description | ORC2 - Putative origin recognition complex subunit 2, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4446710-4449163 Nucleotide Length: 996 |
| Protein-coding | LOC_Os03g08640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49010 LOC_Os01g63710 LOC_Os01g36390 LOC_Os02g55410 LOC_Os03g02680 LOC_Os03g01850 LOC_Os02g58220 LOC_Os02g53680 LOC_Os01g62230 LOC_Os02g30800 LOC_Os03g03150 More.. |
| Downstream Genes | LOC_Os06g08790 LOC_Os11g29380 LOC_Os12g37400 LOC_Os07g43540 LOC_Os09g17850 LOC_Os12g03130 LOC_Os11g03430 LOC_Os10g26280 LOC_Os05g14590 LOC_Os03g55200 LOC_Os04g10650 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5522 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08640.2 |
| Rice Genome Annotation | LOC_Os03g08640.2 |
| Ricechip | LOC_Os03g08640.2 |
| KEGG | osa:4331860 dosa:Os03t0184700-01 |
| Entrez-Gene | 4331860 |