RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g08790.1 View Network Show in Genome Browser |
| Other Names | Os03g0186900 |
| Description | aspartic proteinase nepenthesin precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4541351-4543107 Nucleotide Length: 1317 |
| Protein-coding | LOC_Os03g08790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53200 LOC_Os02g15690 LOC_Os03g03360 LOC_Os02g49800 LOC_Os02g58720 LOC_Os02g38240 LOC_Os02g15900 LOC_Os02g42380 LOC_Os02g43660 LOC_Os01g42520 LOC_Os01g04720 More.. |
| Downstream Genes | LOC_Os03g36540 LOC_Os09g32988 LOC_Os08g29200 LOC_Os05g33080 LOC_Os12g38360 LOC_Os03g55930 LOC_Os06g20320 LOC_Os06g01490 LOC_Os04g54810 LOC_Os03g49610 LOC_Os07g38590 More.. |
| Reference | |
|---|---|
| PubMed | 23385589 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g08790.1 |
| Rice Genome Annotation | LOC_Os03g08790.1 |
| Ricechip | LOC_Os03g08790.1 |
| KEGG | osa:4331874 dosa:Os03t0186900-01 |
| Entrez-Gene | 4331874 |