RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g09180.1 View Network Show in Genome Browser |
| Other Names | Os03g0192000 |
| Description | trpH, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4786018-4789365 Nucleotide Length: 1290 |
| Protein-coding | LOC_Os03g09180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03450 LOC_Os02g16630 |
| Downstream Genes | LOC_Os08g41910 LOC_Os03g58260 LOC_Os09g08130 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g09180.1 |
| Rice Genome Annotation | LOC_Os03g09180.1 |
| Ricechip | LOC_Os03g09180.1 |
| KEGG | osa:4331911 dosa:Os03t0192000-01 |
| Entrez-Gene | 4331911 |