RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g09220.4 View Network Show in Genome Browser |
| Other Names | Os03g0192500 |
| Description | stage II sporulation protein E, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4815464-4820417 Nucleotide Length: 1302 |
| Protein-coding | LOC_Os03g09220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g41710 LOC_Os01g31690 LOC_Os02g10390 LOC_Os02g02890 LOC_Os03g03910 LOC_Os01g10400 LOC_Os03g03860 LOC_Os02g47020 LOC_Os01g09200 |
| Downstream Genes | LOC_Os06g15400 LOC_Os07g37550 LOC_Os07g37240 LOC_Os12g07210 LOC_Os11g07020 LOC_Os08g33820 LOC_Os05g48630 LOC_Os12g19470 LOC_Os12g19381 LOC_Os07g05480 LOC_Os03g22370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g09220.4 |
| Rice Genome Annotation | LOC_Os03g09220.4 |
| Ricechip | LOC_Os03g09220.4 |
| KEGG | osa:4331915 dosa:Os03t0192500-01 |
| Entrez-Gene | 4331915 |