RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g09280.1 View Network Show in Genome Browser |
| Other Names | Os03g0193000 |
| Description | gibberellin response modulator protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4847121-4853832 Nucleotide Length: 1608 |
| Protein-coding | LOC_Os03g09280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42314 LOC_Os01g55780 |
| Downstream Genes | LOC_Os09g24650 LOC_Os03g25070 LOC_Os04g53690 LOC_Os07g45064 LOC_Os09g34040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g09280.1 |
| Rice Genome Annotation | LOC_Os03g09280.1 |
| Ricechip | LOC_Os03g09280.1 |
| KEGG | osa:4331920 dosa:Os03t0193000-01 |
| Entrez-Gene | 4331920 |