RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g09940.1 View Network Show in Genome Browser
Other Names	Os03g0195500,Os03g0195450
Description	sulfate transporter, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 4954101-4959448 Nucleotide Length: 1983
Protein-coding	LOC_Os03g09940

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005215	transporter activity	Molecular Function	IEA
GO:0005215	transporter activity	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g55500 LOC_Os02g50820 LOC_Os02g03540 LOC_Os03g06520 LOC_Os01g52130 LOC_Os02g34680 LOC_Os03g03150
Downstream Genes	LOC_Os09g15170 LOC_Os06g05160 LOC_Os09g06499 LOC_Os03g60880 LOC_Os09g21340 LOC_Os12g39420 LOC_Os08g32500 LOC_Os08g28170 LOC_Os03g48810 LOC_Os04g55800 LOC_Os08g31410 More..

miRNA Regulations
miRNAs	osa-miR395b osa-miR395d osa-miR395e osa-miR395g osa-miR395h osa-miR395i osa-miR395j osa-miR395k osa-miR395l osa-miR395m osa-miR395n osa-miR395p osa-miR395q osa-miR395r osa-miR395s osa-miR395y osa-miR395c osa-miR395o osa-miR395t osa-miR395a osa-miR395f osa-miR395x osa-miR5075 osa-miR395u osa-miR395v

Database Links
Gramene	LOC_Os03g09940.1
Rice Genome Annotation	LOC_Os03g09940.1
Ricechip	LOC_Os03g09940.1
KEGG	osa:4331934 dosa:Os03t0195500-01 dosa:Os03t0195450-00
Entrez-Gene	4331934