RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g09980.1 View Network Show in Genome Browser |
| Other Names | Os03g0196000 |
| Description | sulfate transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 4996773-5002177 Nucleotide Length: 1959 |
| Protein-coding | LOC_Os03g09980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55500 LOC_Os02g50820 LOC_Os02g03540 LOC_Os03g06520 LOC_Os03g09970 LOC_Os02g34680 LOC_Os01g52130 LOC_Os03g03150 LOC_Os03g09940 LOC_Os01g41050 |
| Downstream Genes | LOC_Os09g15170 LOC_Os09g06499 LOC_Os06g05160 LOC_Os03g60880 LOC_Os09g21340 LOC_Os12g39420 LOC_Os08g32500 LOC_Os08g28170 LOC_Os03g48810 LOC_Os04g55800 LOC_Os08g31410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g09980.1 |
| Rice Genome Annotation | LOC_Os03g09980.1 |
| Ricechip | LOC_Os03g09980.1 |
| KEGG | osa:4331937 dosa:Os03t0196000-00 |
| Entrez-Gene | 4331937 |