RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10050.1 View Network Show in Genome Browser |
| Other Names | Os03g0196600 |
| Description | serine acetyltransferase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5063813-5065197 Nucleotide Length: 948 |
| Protein-coding | LOC_Os03g10050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62840 LOC_Os02g56740 LOC_Os01g14950 LOC_Os02g45660 LOC_Os01g24060 LOC_Os03g04960 LOC_Os01g53890 LOC_Os01g39630 LOC_Os01g66360 |
| Downstream Genes | LOC_Os08g13930 LOC_Os03g16150 LOC_Os11g13420 LOC_Os05g25400 LOC_Os07g33850 LOC_Os05g06350 LOC_Os03g62610 LOC_Os08g39600 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn00920 rn01100 rn01120 |
| Metacyc Pathways | CYSTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10050.1 |
| Rice Genome Annotation | LOC_Os03g10050.1 |
| Ricechip | LOC_Os03g10050.1 |
| KEGG | osa:4331941 dosa:Os03t0196600-01 |
| Entrez-Gene | 4331941 |