RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10060.1 View Network Show in Genome Browser |
| Other Names | Os03g0196800 |
| Description | S10/S20 domain containing ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5078136-5081710 Nucleotide Length: 558 |
| Protein-coding | LOC_Os03g10060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04460 LOC_Os03g03360 LOC_Os01g59060 LOC_Os01g14830 LOC_Os01g61814 LOC_Os02g51790 LOC_Os02g38210 LOC_Os03g04590 LOC_Os01g42980 LOC_Os02g30050 LOC_Os03g08020 More.. |
| Downstream Genes | LOC_Os03g15870 LOC_Os03g24020 LOC_Os09g10760 LOC_Os04g45490 LOC_Os03g58430 LOC_Os07g08660 LOC_Os03g61260 LOC_Os07g23244 LOC_Os11g37510 LOC_Os03g60400 LOC_Os12g30490 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5519 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10060.1 |
| Rice Genome Annotation | LOC_Os03g10060.1 |
| Ricechip | LOC_Os03g10060.1 |
| KEGG | osa:4331942 dosa:Os03t0196800-01 |
| Entrez-Gene | 4331942 |