RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10080.5 View Network Show in Genome Browser |
| Other Names | Os03g0197000,Os03g0197050 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5085624-5089190 Nucleotide Length: 750 |
| Protein-coding | LOC_Os03g10080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04710 LOC_Os02g46320 LOC_Os02g04690 LOC_Os01g56590 LOC_Os02g06490 LOC_Os02g22090 LOC_Os01g40470 LOC_Os01g04840 LOC_Os03g08070 LOC_Os01g13350 |
| Downstream Genes | LOC_Os06g07120 LOC_Os07g41680 LOC_Os05g25310 LOC_Os07g10600 LOC_Os03g12900 LOC_Os12g12580 LOC_Os03g12910 LOC_Os11g08569 LOC_Os12g07110 LOC_Os06g02570 LOC_Os06g09850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10080.5 |
| Rice Genome Annotation | LOC_Os03g10080.5 |
| Ricechip | LOC_Os03g10080.5 |
| KEGG | osa:4331944 dosa:Os03t0197000-01 |
| Entrez-Gene | 4331944 |