RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10120.2 View Network Show in Genome Browser |
| Other Names | Os03g0197400 |
| Description | proteasome subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5118174-5124619 Nucleotide Length: 1200 |
| Protein-coding | LOC_Os03g10120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02540 LOC_Os01g03070 LOC_Os01g32800 LOC_Os02g51180 LOC_Os02g38810 LOC_Os01g16240 LOC_Os01g17190 |
| Downstream Genes | LOC_Os08g02550 LOC_Os04g56070 LOC_Os10g41370 LOC_Os07g30840 LOC_Os04g40850 LOC_Os03g11570 LOC_Os07g12110 LOC_Os04g36700 LOC_Os04g34930 LOC_Os07g03230 LOC_Os04g01290 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10120.2 |
| Rice Genome Annotation | LOC_Os03g10120.2 |
| Ricechip | LOC_Os03g10120.2 |
| KEGG | osa:4331948 dosa:Os03t0197400-01 |
| Entrez-Gene | 4331948 |