RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10180.1 View Network Show in Genome Browser |
| Other Names | Os03g0198300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5161510-5166769 Nucleotide Length: 1824 |
| Protein-coding | LOC_Os03g10180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38250 LOC_Os02g32120 LOC_Os01g62290 LOC_Os03g06190 LOC_Os03g07580 LOC_Os02g39890 LOC_Os02g27470 LOC_Os01g65220 LOC_Os01g44394 LOC_Os01g68790 LOC_Os02g12850 More.. |
| Downstream Genes | LOC_Os10g33770 LOC_Os04g32660 LOC_Os05g38530 LOC_Os03g16860 LOC_Os03g46770 LOC_Os04g26841 LOC_Os11g47760 LOC_Os03g60620 LOC_Os11g42420 LOC_Os12g43600 LOC_Os03g16920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10180.1 |
| Rice Genome Annotation | LOC_Os03g10180.1 |
| Ricechip | LOC_Os03g10180.1 |
| KEGG | osa:4331953 dosa:Os03t0198300-01 |
| Entrez-Gene | 4331953 |