RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10510.1 View Network Show in Genome Browser |
| Other Names | Os03g0202200 |
| Description | outer mitochondrial membrane porin, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5348254-5349852 Nucleotide Length: 834 |
| Protein-coding | LOC_Os03g10510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16910 LOC_Os01g40570 LOC_Os01g51770 LOC_Os03g02260 LOC_Os02g19510 LOC_Os03g04460 LOC_Os01g59930 LOC_Os02g53420 LOC_Os02g28810 LOC_Os03g04970 LOC_Os02g01332 More.. |
| Downstream Genes | LOC_Os03g20750 LOC_Os09g19734 LOC_Os03g18420 LOC_Os06g06090 LOC_Os03g17700 LOC_Os05g45950 LOC_Os05g22940 LOC_Os04g56710 LOC_Os08g29669 LOC_Os10g32550 LOC_Os10g39810 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10510.1 |
| Rice Genome Annotation | LOC_Os03g10510.1 |
| Ricechip | LOC_Os03g10510.1 |
| KEGG | osa:4331978 dosa:Os03t0202200-01 |
| Entrez-Gene | 4331978 |