RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g10620.1 View Network Show in Genome Browser |
| Other Names | Os03g0203451,Os03g0203200 |
| Description | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 5422148-5426577 Nucleotide Length: 969 |
| Protein-coding | LOC_Os03g10620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g28450 LOC_Os01g53450 |
| Downstream Genes | LOC_Os05g31970 LOC_Os09g31130 LOC_Os10g41150 LOC_Os08g44850 LOC_Os07g30154 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Reference | |
|---|---|
| PubMed | 19542179 19542179 19603144 19603144 19579033 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g10620.1 |
| Rice Genome Annotation | LOC_Os03g10620.1 |
| Ricechip | LOC_Os03g10620.1 |
| KEGG | osa:4331983 dosa:Os03t0203200-01 |
| Entrez-Gene | 4347268 |